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authorTim Biermann <tbier@posteo.de>2020-05-24 09:52:56 +0000
committerTim Biermann <tbier@posteo.de>2020-05-24 09:53:11 +0000
commit64328a81dc9e11e126dbc5cb3fac7cf25a105f82 (patch)
treec5ad5bea187b8033974f06dbb79a8e24337d2f15 /rstudio
parent230226be3c45267491706ad81b4833d44996db14 (diff)
downloadcontrib-64328a81dc9e11e126dbc5cb3fac7cf25a105f82.tar.gz
contrib-64328a81dc9e11e126dbc5cb3fac7cf25a105f82.tar.xz
rstudio: 1.2.5042 -> 1.3.959
Diffstat (limited to 'rstudio')
-rw-r--r--rstudio/.footprint1263
-rw-r--r--rstudio/.signature13
-rw-r--r--rstudio/Pkgfile48
-rw-r--r--rstudio/rstudio-1.2.1335-boost-1.70.0_p1.patch46
-rw-r--r--rstudio/rstudio-1.2.1335-boost-1.70.0_p2.patch17
-rw-r--r--rstudio/rstudio-1.2.1335-boost-1.72-filesystem.patch31
6 files changed, 1113 insertions, 305 deletions
diff --git a/rstudio/.footprint b/rstudio/.footprint
index 90eda57ee..870f5ba72 100644
--- a/rstudio/.footprint
+++ b/rstudio/.footprint
@@ -2,6 +2,782 @@ drwxr-xr-x root/root usr/
drwxr-xr-x root/root usr/bin/
lrwxrwxrwx root/root usr/bin/rstudio -> /usr/lib/rstudio/bin/rstudio
drwxr-xr-x root/root usr/lib/
+drwxr-xr-x root/root usr/lib/R/
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+-rw-r--r-- root/root usr/lib/R/library/R6/DESCRIPTION
+-rw-r--r-- root/root usr/lib/R/library/R6/INDEX
+-rw-r--r-- root/root usr/lib/R/library/R6/LICENSE
+drwxr-xr-x root/root usr/lib/R/library/R6/Meta/
+-rw-r--r-- root/root usr/lib/R/library/R6/Meta/Rd.rds
+-rw-r--r-- root/root usr/lib/R/library/R6/Meta/features.rds
+-rw-r--r-- root/root usr/lib/R/library/R6/Meta/hsearch.rds
+-rw-r--r-- root/root usr/lib/R/library/R6/Meta/links.rds
+-rw-r--r-- root/root usr/lib/R/library/R6/Meta/nsInfo.rds
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+-rw-r--r-- root/root usr/lib/R/library/R6/NAMESPACE
+-rw-r--r-- root/root usr/lib/R/library/R6/NEWS.md
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+-rw-r--r-- root/root usr/lib/R/library/R6/R/R6.rdb
+-rw-r--r-- root/root usr/lib/R/library/R6/R/R6.rdx
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+-rw-r--r-- root/root usr/lib/R/library/R6/html/00Index.html
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+drwxr-xr-x root/root usr/lib/rstudio/www/rstudio/deferredjs/E34B02AA392E8D9C38E1582D3F6FA45D/
+-rw-r--r-- root/root usr/lib/rstudio/www/rstudio/deferredjs/E34B02AA392E8D9C38E1582D3F6FA45D/1.cache.js
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+-rw-r--r-- root/root usr/lib/rstudio/www/rstudio/deferredjs/E34B02AA392E8D9C38E1582D3F6FA45D/7.cache.js
+-rw-r--r-- root/root usr/lib/rstudio/www/rstudio/deferredjs/E34B02AA392E8D9C38E1582D3F6FA45D/8.cache.js
+-rw-r--r-- root/root usr/lib/rstudio/www/rstudio/deferredjs/E34B02AA392E8D9C38E1582D3F6FA45D/9.cache.js
-rw-r--r-- root/root usr/lib/rstudio/www/rstudio/rstudio.devmode.js
-rw-r--r-- root/root usr/lib/rstudio/www/rstudio/rstudio.nocache.js
drwxr-xr-x root/root usr/lib/rstudio/www/templates/
diff --git a/rstudio/.signature b/rstudio/.signature
index 28f42ed15..56845c419 100644
--- a/rstudio/.signature
+++ b/rstudio/.signature
@@ -1,12 +1,7 @@
untrusted comment: verify with /etc/ports/contrib.pub
-RWSagIOpLGJF3zNSASryMVzyTNdta5KnJ9OSN172yGaM+8fBV79LWdH5eB+yb6HBZ0IdszSOba271oXQQi7lnVpGaerY1TJMoQs=
-SHA256 (Pkgfile) = 9cf2cb83524ea25e75834f3a432a7c96ec0dbfb8250e53552bf8fe7eb6e3f508
-SHA256 (.footprint) = bcde50a8850d52066713cd22252d77e2a3afcc7eb436b954816a5ef82594db16
-SHA256 (rstudio-1.2.5042.tar.gz) = 2bcd1d525d92e9ce42f4c7a57383c025e10d34313f8ed245429f02980b47c1fc
-SHA256 (gin-2.1.2.zip) = b98e704164f54be596779696a3fcd11be5785c9907a99ec535ff6e9525ad5f9a
-SHA256 (gwt-2.8.1.zip) = 0b7af89fdadb4ec51cdb400ace94637d6fe9ffa401b168e2c3d372392a00a0a7
-SHA256 (core-dictionaries.zip) = 4341a9630efb9dcf7f215c324136407f3b3d6003e1c96f2e5e1f9f14d5787494
-SHA256 (rstudio-1.2.1335-boost-1.70.0_p1.patch) = 0e7a4e1e6c43d0dcee80c63ffdebbaf8335a4a693ab693e9dab75d85edd0d24a
-SHA256 (rstudio-1.2.1335-boost-1.70.0_p2.patch) = 3add12ebcdab67ad14ac6ec4bf5e960a08a829ebd40442843513d7c3243f3445
+RWSagIOpLGJF393DYNlLhrXs+Z5XaG/yTsSC0v5Ug+gTPxEqCYea6IM1DtP/jcmXZF9Q18eYRFKn35vsrGUAhphhXx6k+olL/A8=
+SHA256 (Pkgfile) = 039ad16f72829232448ba02cc3def614f1748c92097eaa3d3f23c1862e47133c
+SHA256 (.footprint) = bf3fa23bf5e92b768b35aad58d193e3911f4bbbf69a901b871e22168a5bd53c8
+SHA256 (rstudio-1.3.959.tar.gz) = 5c89fe18e3d5ead0e7921c88e5fb42ed816823238e84135f5e9e3a364d35fcc1
SHA256 (rstudio-1.2.5042-boost-1.73.0.patch) = 5d282059731b64579c0f8c8eeb280b4c4efe810ce829ad7332385b0a92e1215e
SHA256 (r-nosave.patch) = 88d6924605de8d9e50c545bbf1e18a1146db8756be3d65e3e47e7cc1f7f324be
diff --git a/rstudio/Pkgfile b/rstudio/Pkgfile
index a1502f0cf..94d8beb57 100644
--- a/rstudio/Pkgfile
+++ b/rstudio/Pkgfile
@@ -4,69 +4,35 @@
# Depends on: ant boost hyphen libevent mathjax openjdk8 pandoc-bin qtwebengine r
name=rstudio
-version=1.2.5042
-release=2
+version=1.3.959
+release=1
-# $SRC/$name-$version/dependencies/common/install-gwt
-_gwtver=2.8.1
-_ginver=2.1.2
-
-source=(
- https://github.com/rstudio/rstudio/archive/v$version/$name-$version.tar.gz
- https://s3.amazonaws.com/rstudio-buildtools/gin-$_ginver.zip
- https://s3.amazonaws.com/rstudio-buildtools/gwt-$_gwtver.zip
- https://s3.amazonaws.com/rstudio-dictionaries/core-dictionaries.zip
+source=(https://github.com/rstudio/rstudio/archive/v$version/$name-$version.tar.gz
# https://gitweb.gentoo.org/repo/gentoo.git/tree/sci-mathematics/rstudio/files
- rstudio-1.2.1335-boost-1.70.0_p1.patch rstudio-1.2.1335-boost-1.70.0_p2.patch
rstudio-1.2.5042-boost-1.73.0.patch
# https://github.com/rstudio/rstudio/commit/60dd6e3cd349cc208e33a12635378a1e338f8efc.patch
r-nosave.patch)
git=(https://github.com/rstudio/rstudio.git)
-unpack_source() {
- for file in ${source[@]}; do
- case ${file##*/} in
- rstudio-$version.tar.gz)
- bsdtar -p -o -C $SRC -xf $(get_filename $file) ;;
- #if you need a git based build, comment the line above and uncomment the line below
- #git clone $git $SRC/$name-$version ;;
- gwt-$_gwtver.zip)
- gwtdir=$SRC/$name-$version/src/gwt
-
- install -d $gwtdir/dictionaries
- install -d $gwtdir/lib/gwt
- install -d $gwtdir/lib/gwt/$_gwtver
- unzip -qd $gwtdir/lib/gwt/$_gwtver $(get_filename $file) # ;;
- mv $gwtdir/lib/gwt/$_gwtver/gwt-$_gwtver/* $gwtdir/lib/gwt/$_gwtver ;;
- gin-$_ginver.zip)
- gwtdir=$SRC/$name-$version/src/gwt
- install -d $gwtdir/lib/gin
- install -d $gwtdir/lib/gin/$_ginver
- unzip -qo $(get_filename $file) -d $gwtdir/lib/gin/$_ginver ;;
- *)
- cp $(get_filename $file) $SRC ;;
- esac
- done
-}
-
build() {
## if you want your git snapshot to be a particular version
## uncomment below and change every occurance of $name-$version to $name
#git checkout v$version $name
- patch -Np1 -d $name-$version -i $SRC/rstudio-1.2.1335-boost-1.70.0_p1.patch
- patch -Np1 -d $name-$version -i $SRC/rstudio-1.2.1335-boost-1.70.0_p2.patch
patch -Np1 -d $name-$version -i $SRC/rstudio-1.2.5042-boost-1.73.0.patch
sed -i 's/2009-12/2009-19/g' $name-$version/src/cpp/r/session/REmbeddedPosix.cpp
+ sed -i 's/PBC/Inc./g' $name-$version/src/cpp/r/config.h.in
+ sed -i 's/PBC/Inc./g' $name-$version/src/cpp/r/session/REmbeddedPosix.cpp
patch -Np1 -d $name-$version -i $SRC/r-nosave.patch
pushd $name-$version/dependencies/common
install -d pandoc
ln -sfT /usr/share/myspell/dicts dictionaries
- ln -sfT /usr/share/mathjax mathjax-26
+ ln -sfT /usr/share/mathjax mathjax-27
ln -sfT /usr/bin/pandoc pandoc/pandoc
ln -sfT /usr/bin/pandoc-citeproc pandoc/pandoc-citeproc
+ export R_LIBS_USER="$PKG/usr/lib/R/library/"
bash install-packages
popd
diff --git a/rstudio/rstudio-1.2.1335-boost-1.70.0_p1.patch b/rstudio/rstudio-1.2.1335-boost-1.70.0_p1.patch
deleted file mode 100644
index 1ec458bb8..000000000
--- a/rstudio/rstudio-1.2.1335-boost-1.70.0_p1.patch
+++ /dev/null
@@ -1,46 +0,0 @@
---- rstudio-1.2.1335-orig/src/cpp/ext/websocketpp/transport/asio/connection.hpp 2019-03-28 16:08:20.000000000 +1100
-+++ rstudio-1.2.1335/src/cpp/ext/websocketpp/transport/asio/connection.hpp 2019-08-20 22:38:53.808923305 +1000
-@@ -296,7 +296,11 @@
- */
- timer_ptr set_timer(long duration, timer_handler callback) {
- timer_ptr new_timer = lib::make_shared<boost::asio::deadline_timer>(
-+#if defined(BOOST_VERSION) && BOOST_VERSION >= 107000
-+ *m_io_service,
-+#else
- lib::ref(*m_io_service),
-+#endif
- boost::posix_time::milliseconds(duration)
- );
-
---- rstudio-1.2.1335-orig/src/cpp/ext/websocketpp/transport/asio/endpoint.hpp 2019-03-28 16:08:20.000000000 +1100
-+++ rstudio-1.2.1335/src/cpp/ext/websocketpp/transport/asio/endpoint.hpp 2019-08-20 22:38:53.822923358 +1000
-@@ -184,7 +184,12 @@
- m_io_service = ptr;
- m_external_io_service = true;
- m_acceptor = lib::make_shared<boost::asio::ip::tcp::acceptor>(
-- lib::ref(*m_io_service));
-+#if defined(BOOST_VERSION) && BOOST_VERSION >= 107000
-+ *m_io_service
-+#else
-+ lib::ref(*m_io_service)
-+#endif
-+ );
-
- m_state = READY;
- ec = lib::error_code();
---- rstudio-1.2.1335-orig/src/cpp/ext/websocketpp/transport/asio/security/none.hpp 2019-03-28 16:08:20.000000000 +1100
-+++ rstudio-1.2.1335/src/cpp/ext/websocketpp/transport/asio/security/none.hpp 2019-08-20 22:38:53.823923362 +1000
-@@ -167,7 +167,12 @@
- }
-
- m_socket = lib::make_shared<boost::asio::ip::tcp::socket>(
-- lib::ref(*service));
-+#if defined(BOOST_VERSION) && BOOST_VERSION >= 107000
-+ *service
-+#else
-+ lib::ref(*service)
-+#endif
-+ );
-
- m_state = READY;
-
diff --git a/rstudio/rstudio-1.2.1335-boost-1.70.0_p2.patch b/rstudio/rstudio-1.2.1335-boost-1.70.0_p2.patch
deleted file mode 100644
index eed2c5c95..000000000
--- a/rstudio/rstudio-1.2.1335-boost-1.70.0_p2.patch
+++ /dev/null
@@ -1,17 +0,0 @@
---- rstudio-1.2.1335-orig/src/cpp/core/include/core/http/TcpIpAsyncConnector.hpp 2019-03-28 16:08:20.000000000 +1100
-+++ rstudio-1.2.1335/src/cpp/core/include/core/http/TcpIpAsyncConnector.hpp 2019-04-09 22:08:45.331273559 +1000
-@@ -77,7 +77,13 @@
- {
- // start a timer that will cancel any outstanding asynchronous operations
- // when it elapses if the connection operation has not succeeded
-- pConnectionTimer_.reset(new boost::asio::deadline_timer(resolver_.get_io_service(), timeout));
-+ pConnectionTimer_.reset(new boost::asio::deadline_timer(
-+#if BOOST_VERSION >= 107000
-+ resolver_.get_executor(),
-+#else
-+ resolver_.get_io_service(),
-+#endif
-+ timeout));
- pConnectionTimer_->async_wait(boost::bind(&TcpIpAsyncConnector::onConnectionTimeout,
- TcpIpAsyncConnector::shared_from_this(),
- boost::asio::placeholders::error));
diff --git a/rstudio/rstudio-1.2.1335-boost-1.72-filesystem.patch b/rstudio/rstudio-1.2.1335-boost-1.72-filesystem.patch
deleted file mode 100644
index b2c4d2392..000000000
--- a/rstudio/rstudio-1.2.1335-boost-1.72-filesystem.patch
+++ /dev/null
@@ -1,31 +0,0 @@
-From a11d0454e5fe9c50005a03b9d9de84355df5c7fd Mon Sep 17 00:00:00 2001
-From: Kevin Ushey <kevinushey@gmail.com>
-Date: Fri, 15 Nov 2019 14:54:02 -0800
-Subject: [PATCH] avoid use of deprecated APIs
-
----
- src/cpp/core/FilePath.cpp | 4 +---
- 1 file changed, 1 insertion(+), 3 deletions(-)
-
-diff --git a/src/cpp/shared_core/FilePath.cpp b/src/cpp/shared_core/FilePath.cpp
-index 088366a9d6..495289e7fc 100644
---- a/src/cpp/core/FilePath.cpp
-+++ b/src/cpp/core/FilePath.cpp
-@@ -22,8 +22,6 @@
- #include <windows.h>
- #endif
-
--#define BOOST_FILESYSTEM_NO_DEPRECATED
--
- #define BOOST_NO_CXX11_SCOPED_ENUMS
- #include <boost/filesystem.hpp>
- #undef BOOST_NO_CXX11_SCOPED_ENUMS
-@@ -1032,7 +1030,7 @@
- {
- // NOTE: The path gets round-tripped through toString/fromString, would
- // be nice to have a direct constructor
-- if (!iterationFunction(itr.level(),
-+ if (!iterationFunction(itr.depth(),
- FilePath(BOOST_FS_PATH2STR(itr->path()))))
- {
- // end the iteration if requested

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